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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs16849068 chr1:175711116 C/A PRHOXNB chr13:28552243-28562774:- 0.75 8.15 7.46E-11 Box Plot
ACC rs16852783 chr3:168618675 A/G OR5V1 chr6:29323007-29399744:- 0.63 7.7 3.83E-10 Box Plot
ACC rs16858557 chr1:233189946 A/G PRHOXNB chr13:28552243-28562774:- 0.58 7.95 1.52E-10 Box Plot
ACC rs16876653 chr5:71534207 T/C GDPD5 chr11:75145685-75236948:- -0.77 -7.75 3.21E-10 Box Plot
ACC rs16882683 chr8:112828038 T/C KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs16882683 chr8:112828038 T/C KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot
ACC rs16882739 chr8:112833895 C/A KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs16882739 chr8:112833895 C/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs16882742 chr8:112839846 G/A KRT14 chr17:39738531-39743173:- 1.12 7.52 7.44E-10 Box Plot
ACC rs16882742 chr8:112839846 G/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.64E-16 Box Plot
ACC rs16882989 chr8:113013146 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs16883246 chr4:30291536 G/A OR6C3 chr12:55725485-55726420:+ 1.16 10.36 2.99E-14 Box Plot
ACC rs16898894 chr8:102020449 C/T PRHOXNB chr13:28552243-28562774:- 0.65 9.15 2.03E-12 Box Plot
ACC rs16964381 chr13:104879632 C/T PRHOXNB chr13:28552243-28562774:- 0.56 7.93 1.63E-10 Box Plot
ACC rs16964761 chr13:105086976 A/G DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot